Chez Charles/ tags/ pages tagged repeat
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Replitrons: A major group of eukaryotic transposons encoding HUH endonuclease.
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Twin priming: a proposed mechanism for the creation of inversions in L1 retrotransposition.
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Chromosome evolution and the genetic basis of agronomically important traits in greater yam.
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Improved DNA-versus-Protein Homology Search for Protein Fossils
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The transposon Galileo generates natural chromosomal inversions in Drosophila by ectopic recombination.
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DNA repair inhibition leads to active export of repetitive sequences to the cytoplasm triggering an inflammatory response.
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Exosome-mediated horizontal gene transfer occurs in double-strand break repair during genome editing.
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Embryonic expression of endogenous retroviral RNAs in somatic tissues adjacent to the Oikopleura germline.
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Retroelement dynamics and a novel type of chordate retrovirus-like element in the miniature genome of the tunicate Oikopleura dioica.
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Gibbon genome and the fast karyotype evolution of small apes.
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Tandem-genotypes: robust detection of tandem repeat expansions from long DNA reads.
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Massive Changes of Genome Size Driven by Expansions of Non-autonomous Transposable Elements.
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Integrated analysis sheds light on evolutionary trajectories of young transcription start sites in the human genome.
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Selective silencing of euchromatic L1s revealed by genome-wide screens for L1 regulators.
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Heritable L1 retrotransposition in the mouse primordial germline and early embryo.
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Ubiquitously expressed genes participate in cell-specific functions via alternative promoter usage
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The retrovirus HERVH is a long noncoding RNA required for human embryonic stem cell identity.
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PKR is activated by cellular dsRNAs during mitosis and acts as a mitotic regulator.
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MuLV-related endogenous retroviral elements and Flt3 participate in aberrant end-joining events that promote B-cell leukemogenesis.
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An antisense promoter in mouse L1 retrotransposon open reading frame-1 initiates expression of diverse fusion transcripts and limits retrotransposition.
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Embryonic stem cell potency fluctuates with endogenous retrovirus activity.
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Differential L1 regulation in pluripotent stem cells of humans and apes.
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RNA polymerase II acts as an RNA-dependent RNA polymerase to extend and destabilize a non-coding RNA.
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RNAi triggered by specialized machinery silences developmental genes and retrotransposons.
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In Vivo Epigenomic Profiling of Germ Cells Reveals Germ Cell Molecular Signatures.
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Chromatin signatures and retrotransposon profiling in mouse embryos reveal regulation of LINE-1 by RNA.
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High-fidelity promoter profiling reveals widespread alternative promoter usage and transposon-driven developmental gene expression.
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Extensive somatic L1 retrotransposition in colorectal tumors.
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Deep sequencing of RNA from immune cell-derived vesicles uncovers the selective incorporation of small non-coding RNA biotypes with potential regulatory functions.
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Long non-coding antisense RNA controls Uchl1 translation through an embedded SINEB2 repeat.
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Human intron-encoded Alu RNAs are processed and packaged into Wdr79-associated nucleoplasmic box H/ACA RNPs.
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Mouse ooplasm confers context-specific reprogramming capacity.
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