Batut P, Dobin A, Plessy C, Carninci P, Gingeras TR.

Genome Res. 2013 Jan;23(1):169-80. doi: 10.1101/gr.139618.112. Epub 2012 Aug 30.

High-fidelity promoter profiling reveals widespread alternative promoter usage and transposon-driven developmental gene expression.

Combines three methods for cap specificity.