Chez Charles/ tags/ pages tagged promoter
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Simple and efficient measurement of transcription initiation and transcript levels with STRIPE-seq
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Embryonic tissue differentiation is characterized by transitions in cell cycle dynamic- associated core promoter regulation.
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Gene expression and cell identity controlled by anaphase-promoting complex.
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Dual-initiation promoters with intertwined canonical and TCT/TOP transcription start sites diversify transcript processing.
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The pluripotent regulatory circuitry connecting promoters to their long-range interacting elements.
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Distinct core promoter codes drive transcription initiation at key developmental transitions in a marine chordate.
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Integrated analysis sheds light on evolutionary trajectories of young transcription start sites in the human genome.
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A code for transcription initiation in mammalian genomes.
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Clustering of DNA sequences in human promoters.
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An abundance of bidirectional promoters in the human genome.
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Alternative TSSs are co-regulated in single cells in the mouse brain.
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Integration of CpG-free DNA induces de novo methylation of CpG islands in pluripotent stem cells.
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The human initiator is a distinct and abundant element that is precisely positioned in focused core promoters.
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Genome-wide uniformity of human 'open' pre-initiation complexes.
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Disruption of promoter memory by synthesis of a long noncoding RNA.
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Pervasive isoform-specific translational regulation via alternative transcription start sites in mammals.
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Ubiquitously expressed genes participate in cell-specific functions via alternative promoter usage
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DTIE, a novel core promoter element that directs start site selection in TATA-less genes.
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TRF2, but not TBP, mediates the transcription of ribosomal protein genes.
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Two independent transcription initiation codes overlap on vertebrate core promoters
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Mapping the fine structure of a eukaryotic promoter input-output function.
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Genomic organization of human transcription initiation complexes.
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Promoter directionality is controlled by U1 snRNP and polyadenylation signals.
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A Sequence in the Drosophila H3-H4 Promoter Triggers Histone Locus Body Assembly and Biosynthesis of Replication-Coupled Histone mRNAs.
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Rigorous and thorough bioinformatic analyses of olfactory receptor promoters confirm enrichment of O/E and homeodomain binding sites but reveal no new common motifs.
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Promoter architecture of mouse olfactory receptor genes.
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PROMoter uPstream Transcripts share characteristics with mRNAs and are produced upstream of all three major types of mammalian promoters.
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High-throughput mapping of the promoters of the mouse olfactory receptor genes reveals a new type of mammalian promoter and provides insight into olfactory receptor gene regulation.
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Genome-wide analysis of promoter architecture in Drosophila melanogaster.
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Molecular recognition of DNA by small molecules.
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Complex transcription and splicing of odorant receptor genes.
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Retrotransposons regulate host genes in mouse oocytes and preimplantation embryos.
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Differentially expressed transcripts from phenotypically identified olfactory sensory neurons.
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Genomic analysis of human microRNA transcripts.
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Chromatin structure analyses identify miRNA promoters.
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Genome-wide detection and analysis of hippocampus core promoters using DeepCAGE.
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Post-transcriptional processing generates a diversity of 5'-modified long and short RNAs.
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Massive transcriptional start site analysis of human genes in hypoxia cells.
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High-throughput verification of transcriptional starting sites by Deep-RACE.
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Stalled Hox promoters as chromosomal boundaries.
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High DNA melting temperature predicts transcription start site location in human and mouse.
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RNA polymerase II-TFIIB structure and mechanism of transcription initiation.
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High-resolution analysis of DNA regulatory elements by synthetic saturation mutagenesis.
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Synthetic design of strong promoters.
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Homotypic clusters of transcription factor binding sites are a key component of human promoters and enhancers.
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A large fraction of extragenic RNA pol II transcription sites overlap enhancers.
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Conserved role of intragenic DNA methylation in regulating alternative promoters.
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TATA is a modular component of synthetic promoters.
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The TCT motif, a key component of an RNA polymerase II transcription system for the translational machinery.
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