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Molecular mechanisms and topological consequences of drastic chromosomal rearrangements of muntjac deer
Posted Tue Oct 10 08:52:12 2023

Third generation sequencing revises the molecular karyotype for Toxoplasma gondii and identifies emerging copy number variants in sexual recombinants
Posted Tue Oct 10 06:32:23 2023

Gene functionalities and genome structure in Bathycoccus prasinos reflect cellular specializations at the base of the green lineage.
Posted Thu Apr 27 09:20:09 2023

The origin, diversification and adaptation of a major mangrove clade (Rhizophoreae) revealed by whole-genome sequencing.
Posted Fri Apr 21 01:04:56 2023

PhyloCSF: a comparative genomics method to distinguish protein coding and non-coding regions.
Posted Mon Mar 13 04:15:07 2023

Three amphioxus reference genomes reveal gene and chromosome evolution of chordates.
Posted Mon Mar 13 04:15:07 2023

Progressive Cactus is a multiple-genome aligner for the thousand-genome era.
Posted Wed Jan 25 06:51:02 2023

Cactus graphs for genome comparisons.
Posted Tue Jan 24 00:35:51 2023

Chromosome-Level Reference Genomes for Two Strains of Caenorhabditis briggsae: An Improved Platform for Comparative Genomics.
Posted Wed Dec 21 03:52:36 2022

A telomere-to-telomere assembly of Oscheius tipulae and the evolution of rhabditid nematode chromosomes.
Posted Mon Dec 19 04:11:49 2022

Genome analysis of the smallest free-living eukaryote Ostreococcus tauri unveils many unique features
Posted Fri Jul 1 04:04:58 2022

Telomere-to-Telomere Genome Assembly of _Bursaphelenchus okinawaensis_ Strain SH1.
Posted Fri Jun 10 01:39:30 2022

Goel M, Sun H, Jiao WB, Schneeberger K. SyRI: finding genomic rearrangements and local sequence differences from whole-genome assemblies.
Posted Wed Jun 1 09:20:52 2022

Emergence of novel cephalopod gene regulation and expression through large-scale genome reorganization.
Posted Tue May 17 04:51:20 2022

Genome and transcriptome mechanisms driving cephalopod evolution.
Posted Tue May 10 04:31:15 2022

Parameters for accurate genome alignment.
Posted Fri Apr 15 06:25:28 2022

AnchorWave: Sensitive alignment of genomes with high sequence diversity, extensive structural polymorphism, and whole-genome duplication.
Posted Thu Jan 6 04:10:09 2022

Evolution's cauldron: duplication, deletion, and rearrangement in the mouse and human genomes.
Posted Tue Jan 4 08:28:20 2022

HiCanu: accurate assembly of segmental duplications, satellites, and allelic variants from high-fidelity long reads
Posted Fri Oct 15 03:45:40 2021

Locally adaptive inversions modulate genetic variation at different geographic scales in a seaweed fly
Posted Fri Jul 16 04:18:07 2021

Giant lungfish genome elucidates the conquest of land by vertebrates.
Posted Wed Jul 7 04:06:04 2021

The Beginning of the End: A Chromosomal Assembly of the New World Malaria Mosquito Ends with a Novel Telomere. G3 (Bethesda).
Posted Mon Jun 21 04:50:19 2021

Chromosomal Inversion Polymorphisms in Two Sympatric Ascidian Lineages.
Posted Thu Jun 17 12:32:31 2021

A haplotype-resolved, de novo genome assembly for the wood tiger moth (Arctia plantaginis) through trio binning.
Posted Fri Jun 4 04:57:53 2021

Transcription-dependent domain-scale three-dimensional genome organization in the dinoflagellate Breviolum minutum.
Posted Tue May 25 04:36:38 2021

Genetic and spatial organization of the unusual chromosomes of the dinoflagellate Symbiodinium microadriaticum.
Posted Tue May 18 04:33:48 2021

Analysis of muntjac deer genome and chromatin architecture reveals rapid karyotype evolution.
Posted Mon May 17 05:10:27 2021

Platypus and echidna genomes reveal mammalian biology and evolution.
Posted Fri Jan 8 04:44:54 2021

Conservative route to genome compaction in a miniature annelid
Posted Mon Oct 26 07:29:50 2020

Eighteen coral genomes reveal the evolutionary origin of Acropora strategies to accommodate environmental changes.
Posted Tue Oct 20 04:31:18 2020

Scallop genome provides insights into evolution of bilaterian karyotype and development.
Posted Fri Oct 2 02:30:56 2020

Vianna JA, Fernandes FAN, Frugone MJ, Figueiró HV, Pertierra LR, Noll D, Bi K, Wang-Claypool CY, Lowther A, Parker P, Le Bohec C, Bonadonna F, Wienecke B, Pistorius P, Steinfurth A, Burridge CP, Dantas GPM, Poulin E, Simison WB, Henderson J, Eizirik E, Nery MF, Bowie RCK.
Posted Mon Sep 14 04:50:57 2020

Increased Mutation Rate Is Linked to Genome Reduction in Prokaryotes.
Posted Tue Aug 11 04:21:21 2020

Assembly of the threespine stickleback Y chromosome reveals convergent signatures of sex chromosome evolution
Posted Tue Aug 4 04:35:55 2020

A genome database for a Japanese population of the larvacean Oikopleura dioica.
Posted Tue Jul 21 04:03:31 2020

Genome sequence of the metazoan plant-parasitic nematode Meloidogyne incognita.
Posted Sun Apr 12 07:29:49 2020

ANISEED 2019: 4D exploration of genetic data for an extended range of tunicates.
Posted Fri Feb 28 04:28:54 2020

Predicting Genes in Single Genomes with AUGUSTUS.
Posted Wed Dec 18 05:06:53 2019

Biology and genome of a newly discovered sibling species of Caenorhabditis elegans
Posted Tue Dec 10 04:24:26 2019

Genome Architecture and Evolution of a Unichromosomal Asexual Nematode.
Posted Thu Nov 28 10:47:26 2019

The genome of a subterrestrial nematode reveals adaptations to heat
Posted Thu Nov 28 05:56:52 2019

Whipworm genome and dual-species transcriptome analyses provide molecular insights into an intimate host-parasite interaction.
Posted Thu Nov 28 05:26:28 2019

Integrating Hi-C links with assembly graphs for chromosome-scale assembly
Posted Mon Oct 28 04:51:02 2019

A nearly-complete genome of Ciona intestinalis type A (C. robusta) reveals the contribution of inversion to chromosomal evolution in the genus Ciona.
Posted Wed Oct 23 02:57:29 2019

The draft genome of Ciona intestinalis: insights into chordate and vertebrate origins.
Posted Wed Oct 2 04:11:36 2019

Assembly of Long Error-Prone Reads Using Repeat Graphs
Posted Wed May 8 07:14:45 2019

Draft genome of the brown alga, Nemacystus decipiens, Onna-1 strain: Fusion of genes involved in the sulfated fucan biosynthesis pathway.
Posted Fri Apr 19 04:48:35 2019

Fast and accurate de novo genome assembly from long uncorrected reads.
Posted Thu Apr 11 04:28:15 2019

Scaffolding of long read assemblies using long range contact information.
Posted Fri Mar 1 04:32:45 2019

Evolutionary genomics of fast evolving tunicates.
Posted Wed Feb 6 07:22:30 2019

Ragout-a reference-assisted assembly tool for bacterial genomes.
Posted Fri Feb 1 00:58:53 2019

Chromosome assembly of large and complex genomes using multiple references.
Posted Fri Feb 1 00:49:57 2019

The Harvest suite for rapid core-genome alignment and visualization of thousands of intraspecific microbial genomes.
Posted Mon Jan 7 04:54:21 2019

Creating a functional single-chromosome yeast.
Posted Fri Aug 10 07:02:14 2018

Single-cell whole-genome analyses by Linear Amplification via Transposon Insertion (LIANTI).
Posted Tue May 15 04:17:54 2018

De novo draft assembly of the Botrylloides leachii genome provides further insight into tunicate evolution.
Posted Mon May 14 23:39:22 2018

Miniature genome in the marine chordate Oikopleura dioica.
Posted Mon Mar 26 01:56:17 2018

Inherited Chromosomally Integrated Human Herpesvirus 6 Genomes Are Ancient, Intact, and Potentially Able To Reactivate from Telomeres.
Posted Tue Dec 12 00:20:51 2017

Robust high-performance nanoliter-volume single-cell multiple displacement amplification on planar substrates.
Posted Thu Jul 28 08:03:04 2016

Low-grade chromosomal mosaicism in human somatic and embryonic stem cell populations.
Posted Wed Jul 9 08:39:52 2014

Mosaic copy number variation in human neurons.
Posted Tue Nov 5 08:55:12 2013

High DNA melting temperature predicts transcription start site location in human and mouse.
Posted Sun Jan 9 15:08:12 2011