Nat Genet. 2014 Jul;46(7):693-700. doi:10.1038/ng.3010

Foth BJ, Tsai IJ, Reid AJ, Bancroft AJ, Nichol S, Tracey A, Holroyd N, Cotton JA, Stanley EJ, Zarowiecki M, Liu JZ, Huckvale T, Cooper PJ, Grencis RK, Berriman M.

Whipworm genome and dual-species transcriptome analyses provide molecular insights into an intimate host-parasite interaction.

Clustering scaffolds on the number of shared orthologs they have with scaffolds of a related species' genome identifies three chromosomes.