work in progress

Hi-C

Little interactions between chromosome arms in Aedes aegypti (Dudchenko and coll., 2017) and Anopheles albimanus (Copmton and coll., 2020).

The Beginning of the End: A Chromosomal Assembly of the New World Malaria Mosquito Ends with a Novel Telomere. G3 (Bethesda).

Compton A, Liang J, Chen C, Lukyanchikova V, Qi Y, Potters M, Settlage R, Miller D, Deschamps S, Mao C, Llaca V, Sharakhov IV, Tu Z.

G3 (Bethesda). 2020 Oct 5;10(10):3811-3819. doi:10.1534/g3.120.401654

The Beginning of the End: A Chromosomal Assembly of the New World Malaria Mosquito Ends with a Novel Telomere. G3 (Bethesda).

Little interactions between chromosome arms.

Posted
De novo assembly of the Aedes aegypti genome using Hi-C yields chromosome-length scaffolds.

Dudchenko O, Batra SS, Omer AD, Nyquist SK, Hoeger M, Durand NC, Shamim MS, Machol I, Lander ES, Aiden AP, Aiden EL.

Science. 2017 Apr 7;356(6333):92-95. doi:10.1126/science.aal3327

De novo assembly of the Aedes aegypti genome using Hi-C yields chromosome-length scaffolds.

Hi-C contacts between telomeres and between centromeres. Few contacts between arms of the same chromosome.