Kelleher J, Wong Y, Wohns AW, Fadil C, Albers PK, McVean G.

Nat Genet. 2019 Sep;51(9):1330-1338. doi:10.1038/s41588-019-0483-y

Inferring whole-genome histories in large population datasets.

Primary paper for the tskit and tsinfer libraries. Uses succinct tree sequence instead of ancestral recombination graphs.