Mitsuhashi S, Frith MC, Mizuguchi T, Miyatake S, Toyota T, Adachi H, Oma Y, Kino Y, Mitsuhashi H, Matsumoto N.

Genome Biol. 2019 Mar 19;20(1):58. doi:10.1186/s13059-019-1667-6

Tandem-genotypes: robust detection of tandem repeat expansions from long DNA reads.

Primary paper for the tandem-genotypes tool. Be sure to compar both strands to prevent confusion between alleles and sequencer-specific biases.