Martin C. Frith, Satomi Mitsuhashi

Methods Mol Biol. 2023;2632:161-175. doi:10.1007/978-1-0716-2996-3_12

Finding Rearrangements in Nanopore DNA Reads with LAST and dnarrange

Tutorial on how to use dnarrange. Examples of gene conversion, repeat insertion in the reference, pseudogene insertion in the query, etc.